2015
  • Woodson JD, Joens MS, Sinson AB, Gilkerson J, Salone PA, Weigel D, Fitzpatrick JAJ and Chory J. Ubiquitin facilitates a quality control pathway that removes damaged chloroplasts. Science. 2015. 350(6259), 450-454.
  • Lee JH, Heuser JE, Roth R, Goodenough U. Eisosome Ultrastructure and Evolution in Fungi, Microalgae, and Lichens. Eukaryotic Cell. 2015. Oct;14(10):1017-42.
  • Kerman BE, Kim HJ, Mei A, Padmanabhan K, Georges S, Joens, MS, Fitzpatrick JAJ, Jappelli R, Chandross KJ, August P, Gage FH. In vitro myelin formation using embryonic stem cells. Development. 2015. 142(12): 2213-25.
2016
  • Dinc E, Tian L, Roy LM, Roth R, Goodenough U, Croce R. LHCSR1 induces a fast and reversible pH-dependent fluorescence quenching in LHCII in Chlamydomonas reinhardtii cells. PNAS. 2016. Jul 5;113(27):7673-8.
  • Mackinder LC, Meyer MT, Mettler-Altmann T, Chen VK, Mitchell MC, Caspari O, Freeman Rosenzweig ES, Pallesen L, Reeves G, Itakura A, Roth R, Sommer F, Geimer S, Mühlhaus T, Schroda M, Goodenough U, Stitt M, Griffiths H, Jonikas MC. A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle. PNAS. 2016. May 24;113(21):5958-63.
2017
  • Gong Y, Sunq A, Roth R, Hou J. Inducible Expression of Claudin-1 in Glomerular Podocytes Generates Aberrant Tight Junctions and Proteinuria through Slit Diaphragm Destabilization. J. Am. Soc. Nephrol. 2017. 28(1):106-117.
  • Lo HG, Jin RU, Sibbel G, Liu D, Karki A, Joens MS, Madison BB, Zhang B, Blanc V, Fitzpatrick JA, Davidson NO, Konieczny SF, Mills JC. A single transcription factor is sufficient to induce and maintain secretory cell architecture. Genes and Development. 2016. 31(2):154-171.
  • Ross MH, Esser AK, Fox GC, Schmieder AH, Yang X, Hu G, Pan D, Su X, Xu Y, Novack DV, Walsh T, Colditz GA, Lukaszewicz GH, Cordell E, Novack J, Fitzpatrick JAJ, Waning DL, Mohammad KS, Guise TA, Lanza GM, Weilbaecher KN. Bone-induced expression of integrin β3 enables targeted nanotherapy of breast cancer metastases. Cancer Research. 2017. 77(22):6299-6312.
  • Walker JN, Flores-Mireles AL, Pinkner CL, Schreiber HL 4th, Joens MS, Park AM, Potretzke AM, Bauman TM, Pinkner JS, Fitzpatrick JAJ, Desai A, Caparon MG, Hultgren SJ. Catheterization alters the bladder ecology to potentiate Staphylococcus aureus infection of the urinary tract. PNAS. 2017. 114(14):E8721–E873.
  • Hummer BH, de Leeuw NF, Burns C, Chen L, Joens MS, Hosford B, Fitzpatrick JAJ, Asensio CS. HID-1 controls formation of large dense core vesicles by influencing cargo sorting and trans-Golgi network acidification. Mol. Biol. Cell. 2017. 28(26):3870-3880.
2018
  • Shih CC, Oakley DM, Joens MS, Roth RA, Fitzpatrick JAJ. Chapter 3: Non-Linear Optical Imaging of Extracellular Matrix Proteins. Methods in Cell Biology. 2018. 143:57-78.
  • Hoshi M, Reginensi A, Joens MS, Fitzpatrick JAJ, McNeill H, Jain S. Reciprocal Spatiotemporally Controlled Apoptosis Regulates Wolffian Duct Cloaca Fusion. J Am Soc Nephrol. 2018. Jan 11. pii: ASN.2017040380
  • Bayguinov PO, Oakley DM, Shih CC, Geanon DJ, Joens MS, Fitzpatrick JAJ. Modern Laser Scanning Confocal Microscopy. Curr Protoc Cytom. 2018. Jul;85(1):e39. doi: 10.1002/cpcy.39.
  • Strubberg AM, Veronese Paniagua DA, Zhao T, Dublin L, Pritchard T, Bayguinov PO, Fitzpatrick JAJ, Madison BB. The Zinc Finger Transcription Factor PLAGL2 Enhances Stem Cell Fate and Activates Expression of ASCL2 in Intestinal Epithelial Cells. Stem Cell Reports. 2018. Jul 9. pii: S2213- 6711(18)30272-8.
  • Cheruiyot A, Li S, Nickless A, Roth R, Fitzpatrick JAJ, You Z. Compound C inhibits nonsense-mediated RNA decay independently of AMPK. PLoS One. 2018. Oct 5;13(10):e0204978.
  • Rogers SC, Dosier LB, McMahon TJ, Zhu H, Timm D, Zhang H, Herbert J, Atallah J, Palmer GM, Cook A, Ernst M, Prakash J, Terng M, Towfighi P, Doctor R, Said A, Joens MS, Fitzpatrick JAJ, Hanna G, Lin X, Reisz JA, Nemkov T, D’Alessandro A, Doctor A. Red blood cell phenotype fidelity following glycerol cryopreservation optimized for research purposes. 2018. Dec 21;13(12):e0209201.
2019
  • Robles H, Park S, Joens MS, Fitzpatrick JAJ, Craft CS, Scheller EL. Characterization of the bone marrow adipocyte niche with three-dimensional electron microscopy. Bone. 2019. Jan;118:89-98.
  • Kim KX, Payne S, Yang-Hood A, Li SZ, Davis B, Carlquist J, V-Ghaffari B, Gantz JA, Kallogjeri D, Fitzpatrick JAJ, Ohlemiller KK, Hirose K, Rutherford MA. Vesicular Glutamatergic Transmission in Noise-induced Loss and Repair of Cochlear Ribbon Synapses. J Neurosci. 2019. Jun 5;39(23):4434-4447.
  • Yang Z, Yan H, Dai W, Jing J, Yang Y, Mahajan S, Zhou Y, Li W, Macaubas C, Mellins ED, Shih CC, Fitzpatrick JAJ, Faccio R. Tmem178 negatively regulates store-operated calcium entry in myeloid cells via association with STIM1. Journal of Autoimmunity. 2019. Jul;101:94-108.
  • Guang Y, McGrath TM, Klug NR, Nims RJ, Shih CC, Bayguinov PO, Guilak F, Pham CTN, Fitzpatrick JAJ, Setton LA. Combined Experimental Approach and Finite Element Modeling of Small Molecule Transport Through Joint Synovium to Measure Effective Diffusivity. J Biomech Eng. 2020 Apr 1;142(4):0410101-8.
  • Krauss JL, Roper PM, Ballard A, Shih CC, Fitzpatrick JAJ, Cassat JE, Ng PY, Pavlos NJ, Veis DJ. Staphylococcus aureus Infects Osteoclasts and Replicates Intracellularly. MBio. 2019. Oct 15;10(5):e02447-19.
2020
  • Hervas R, Rau MJ, Park Y, Zhang W, Murzin AG, Fitzpatrick JAJ, Scheres SHW, Si K. Cryo-EM structure of a neuronal functional amyloid implicated in memory persistence in Drosophila.Science. 2020. Mar 13;367(6483):1230-1234.
  • Deng Z, He Z, Maksaev G, Bitter RM, Rau M, Fitzpatrick JAJ, Yuan P. Cryo-EM structures of the ATP release channel pannexin 1. Nat. Struct. Mol. Biol. 2020. Apr;27(4):373-381.
  • Pavlovic Djuranovic S, Erath J, Andrews RJ, Bayguinov PO, Chung JJ, Chalker DL, Fitzpatrick JA, Moss WN, Szczesny P, Djuranovic S. Plasmodium falciparum translational machinery condones polyadenosine repeats. eLife. 2020. May 29;9:e57799.
  • Deng Z, Maksaev G, Rau M, Xie Z, Hu H, Fitzpatrick JAJ, Yuan P. 2020. Gating of Human TRPv3 in a lipid bilayer. Nat. Struct. Mol. Biol. 2020. Jul;27(7):635-644.
  • Deng Z, Maksaev G, Schlegel AM, Zhang J, Rau M, Fitzpatrick JAJ, Haswell ES, Yuan P. 2020. Structural mechanism for gating of a eukaryotic mechanosensitive channel of small conductance. Nat. Commun. 2020. Jul 23;11(1):3690. 
  • Bayguinov PO, Fisher MR, Fitzpatrick JAJ. 2020. Assaying Three-Dimensional Cellular Architecture using X-Ray Tomographic and Correlated Imaging Approaches. J. Biol. Chem. 2021. Nov 13;295(46):15782-15793.
2021
  • Burns CH, Yau B, Rodriguez A, Triplett J, Maslar D, An YS, van der Welle REN, Kossina RG, Fisher MR, Strout GW, Bayguinov PO, Veenendaal T, Chitayat D, Fitzpatrick JAJ, Klumperman J, Kebede MA, Asensio CS. Pancreatic β-Cell-Specific Deletion of VPS41 Causes Diabetes Due to Defects in Insulin Secretion. Diabetes. 2021 Feb;70(2):436-448.
  • Guang Y, Davis AL, McGrath TM, Pham CTN, Fitzpatrick JAJ, Setton LA. 2021. Size-Dependent Effective Diffusivity in Healthy Human and Porcine Joint Synovium. Ann Biomed Eng. 2021. Apr;49(4):1245-1256. 
  • Rustenhoven J, Drieu A, Mamuladze T, de Lima KA, Dykstra T, Wall M, Papadopoulos Z, Kanamori M, Salvador AF, Baker W, Lemieux M, Da Mesquita S, Cugurra A, Fitzpatrick J, Sviben S, Kossina R, Bayguinov P, Townsend RR, Zhang Q, Erdmann-Gilmore P, Smirnov I, Lopes MB, Herz J, Kipnis J. Functional characterization of the dural sinuses as a neuroimmune interface. Cell. 2021. Feb 18;184(4):1000-1016.e27.
  • Deng Z, Zhao Y, Feng J, Zhang J, Zhao H, Rau MJ, Fitzpatrick JAJ, Hu H, Yuan P. Cryo-EM structure of a proton-activated chloride channel TMEM206. Science Advances. 2021. Feb 24;7(9):eabe5983
  • Newberry EP, Hall Z, Xie Y, Molitor EA, Bayguinov PO, Strout GW, Fitzpatrick JAJ, Brunt EM, Griffin JL, Davidson NO. Liver specific deletion of mouse Tm6sf2 promotes steatosis, fibrosis and hepatocellular cancer. Hepatology. 2021. Feb 27. doi: 10.1002/hep.31771.
  • Bailey AL, Dmytrenko O, Greenberg L, Bredemeyer AL, Ma P, Liu J, Penna V, Winkler ES, Sviben S, Brooks E, Nair AP, Heck KA, Rali AS, Simpson L, Saririan M, Hobohm D, Stump WT, Fitzpatrick JA, Xie X, Zhang X, Shi PY, Hinson JT, Gi WT, Schmidt C, Leuschner F, Lin CY, Diamond MS, Greenberg MJ, Lavine KJ. SARS-CoV-2 Infects Human Engineered Heart Tissues and Models COVID-19 Myocarditis. JACC: Basic to Translational Science. 2021. Apr;6(4):331-345.
  • Jin RU, Brown JW, Li QK, Bayguinov PO, Wang JS, Mills JC.; Collaborators, S.P.J. Whelan, J.A.J. Fitzpatrick, A.K. Meeker. 2021. Tropism of SARS-CoV-2 for Barrett’s Esophagus may Increase Susceptibility to Developing COVID-19. Gastroenterology. 2021. May;160(6):2165-2168.e4.
  • Ruben EA, Rau MJ, Fitzpatrick JAJ, Di Cera E. Enrico Di Cera. Cryo-EM structures of human coagulation factors V and Va . Blood. 2021. Jun 3;137(22):3137-3144.
  • Pandey KK, Bera S, Shi K, Rau MJ, Oleru AV, Fitzpatrick JAJ, Engelman AN, Aihara H, Grandgenett DP. Cryo-EM structure of the Rous sarcoma virus octameric cleaved synaptic complex intasome. Communications Biology. 2021. Mar 12;4(1):330.
  • Fox GC, Su X, Davis JL, Xu Y, Kwakwa KA, Ross MH, Fontana F, Xiang J, Esser AK, Cordell E, Pagliai K, Dang HX, Sivapackiam J, Stewart SA, Maher CA, Bakewell SJ, Fitzpatrick JAJ, Sharma V, Achilefu S, Veis DJ, Lanza GM, Weilbaecher KN. Targeted Therapy to β3 Integrin Reduces Chemoresistance in Breast Cancer Bone Metastases.  Mol. Cancer. Ther. 2021. Jun;20(6):1183-1198.
  • Zarei A, Ballard A, Cox L, Bayguinov P, Harris T, Davis JL, Roper P, Fitzpatrick J, Faccio R, Veis DJ. Osteolineage depletion of mitofusin2 enhances cortical bone formation in female mice. Bone. 2021. Jul;148:115941.
  • Newberry EP, Strout GW, Fitzpatrick JAJ, Davidson NO. Liver-specific deletion of Mttp versus Tm6sf2 reveals distinct defects in stepwise VLDL assembly. J. Lipid. Res. 2021. Apr 26;62:100080.
  • Brioschi S, Wang WL, Peng V, Wang M, Shchukina I, Greenberg ZJ, Bando JK, Jaeger N, Czepielewski RS, Swain A, Mogilenko DA, Beatty WL, Bayguinov P, Fitzpatrick JAJ, Schuettpelz LG, Fronick CC, Smirnov I, Kipnis J, Shapiro VS, Wu GF, Gilfillan S, Cella M, Artyomov MN, Kleinstein SH, Colonna M. Heterogeneity of meningeal B cells reveals a lymphopoietic niche at the CNS borders. Science. 2021. Jun 3;eabf9277.
  • Payne SA, Joens MS, Chung H, Skigen N, Frank A, Gattani S, Vaughn K, Schwed A, Nester M, Bhattacharyya A, Iyer G, Davis B, Carlquist J, Patel H, Fitzpatrick JAJ, Rutherford MA. Maturation of Heterogeneity in Afferent Synapse Ultrastructure in the Mouse Cochlea. Front Synaptic Neurosci. 2021 Jun 17;13:678575.
  • Radyk MD, Spatz LB, Peña BL, Brown JW, Burclaff J, Cho CJ, Kefalov Y, Shih CC, Fitzpatrick JA, Mills JC. ATF3 induces RAB7 to govern autodegradation in paligenosis, a conserved cell plasticity program. EMBO Rep. 2021. Jul 26;e51806.
  • Wong NR, Mohan J, Kopecky BJ, Guo S, Du L, Leid J, Feng G, Lokshina I, Dmytrenko O, Luehmann H, Bajpai G, Ewald L, Bell L, Patel N, Bredemeyer A, Weinheimer CJ, Nigro JM, Kovacs A, Morimoto S, Bayguinov PO, Fisher MR, Stump WT, Greenberg M, Fitzpatrick JAJ, Epelman S, Kreisel D, Sah R, Liu Y, Hu H, Lavine KJ. Resident cardiac macrophages mediate adaptive myocardial remodeling. Immunity. 2021. Jul 21;S1074-7613(21)00289-2.
  • Reddy NC, Majidi SP, Kong L, Nemera M, Ferguson CJ, Moore M, Goncalves TM, Liu HK, Fitzpatrick JAJ, Zhao G, Yamada T, Bonni A, Gabel HW. CHARGE syndrome protein CHD7 regulates epigenomic activation of enhancers in granule cell precursors and gyrification of the cerebellum. Nature Communications. 2021 Sep 29;12(1):5702.
  • Errico JM, Zhao H, Chen RE, Liu Z, Case JB, Ma M, Schmitz AJ, Rau MJ, Fitzpatrick JAJ, Shi PY, Diamond MS, Whelan SPJ, Ellebedy AH, Fremont DH. Structural mechanism of SARS-CoV-2 neutralization by two murine antibodies targeting the RBD. Cell Reports. 2021 Oct 8:109881.