Bitplane Imaris 3D/4D Image Analysis Workshop Lectures

Below you will find the individual lectures on how to use the Bitplane Imaris 3D/4D image analysis software package. The lectures cover the use of Imaris Arena, how to view and edit image properties, basic visualization and measurement techniques, how to create surfaces and extract statistics along with Imaris Cell, Vantage, Tracking / Lineage and Filament Tracer modules. These lectures will cover the following applications and data types:

Applications:

  • 3D visualization techniques & animations
  • Object detection and volumetric statistics
  • Live cell tracking
  • Cell division or lineage tracking
  • 3D Colocalization
  • Neuron tracing & spine detection
  • Blood vessel tracing
  • Analysis of cellular components

Data types:

  • Widefield fluorescence
  • Confocal / Two-photon
  • Live-cell Spinning Disk
  • Super Resolution
  • Light sheet / Planar Illumination

Lectures:

Lecture 1 – Imaris Arena – Download

Lecture 2 – Imaris Image Properties and edit – Download

Lecture 3 – Imaris Visualization Basics – Download

Lecture 4 – Imaris Measurement Points and Spots – Download

Lecture 5 – Imaris Surface Stats and Contour – Download

Lecture 6 – Imaris Cell – Download

Lecture 7 – Imaris Vantage – Download

Lecture 8 – Imaris Cell Tracking and Lineage Tracing – Download

Lecture 9 – Imaris Filament Tracer with XT – Download

Lecture 10 – ImarisXT and Imaris Open – Download

Lecture 11 – Imaris Colocalization – Download

Lecture 12 – Imaris Learning Resources and Services – Download